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OpenFlexTyper
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A class that contains all the properties to directly count kmers.
#include <directSearch.h>
Public Member Functions | |
| KSearch () | |
| Constructor. | |
| virtual | ~KSearch () |
| Destructor. | |
Access | |
Access functions for single kmer and queries | |
| bool | checkForKmer (const std::string &testKmer) const |
| const ft::KmerClass & | getKmer (const std::string &kmer) const |
| void | addKmer (const std::string &kmer) |
| void | addKmerResults (const ft::KmerClass &kmerResult) |
| int | calculateKmerCount (const KmerClass &kmer) |